YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|218202459
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMLSKACSL VASSLPRCSS SAAPTIRGQP SLLPSVRKEW LGKPLLYGIG TLLVMPLRTL  60
   61 HGVGRMFGAG RFLCNMTSVS SSLQIELVPC LQDNYAYILH DVDTGTVGVV DPSEATPIIN 120
  121 ALEKRNQNLT YILNTHHHYD HTGGNLELKA KYGAKVIGSA KDRDRIPGID ITLSEGDTWM 180
  181 FAGHQVLVME TPGHTSGHVC YHFPGSGAIF TGDTLFSLSC GKLFEGTPQQ MYSSLQKIIA 240
  241 LPDETRVYCG HEYTLSNSKF ALSIEPGNKD LQEYAANAAD LRKRNTPTVP TTIGREKQCN 300
  301 PFLRTSSPEI KNTLSIPDHF DDARVLEVVR RAKDNF

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	336	0.99