YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38648854
Protein type:	Transmembrane
Type Confidence:	0.50
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDCYRRYAAV ILVMLSMVLH ILHPLPDGDL IIQGCPECKL KENKYFSKLG APIYQCMGCC  60
   61 FSRAYPTPAR SKKTMLVPKN ITSEATCCVA KSFTKATVMG NARVENHTDC HCSTCYYHKS 120
  121

Type	Start	End	Confidence
Cytoplasmic	1	6	0.43
Transmembrane Helix	7	24	0.48
Non-Cytoplasmic	25	120	0.91