YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|16903144
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKSNSSVGR GPSMISIVFL LGLLMASFET TGAQIGVCYG MLGDRLPPPS EVIALYKQNN  60
   61 IRRMRLYDPN QAALAALKGS YIELMLGVPN DNLQSLASSQ ANANTWVQNN VRNYGNVRFK 120
  121 YIAVGNEVKP SDSYAQFLVP AMQNIQNAIS SAGLGIKVST AVDTGVLGNS FPPSKGEFKS 180
  181 EYGALLNPII RFLVNNRSPL LVNLYPYFSY SSNTHDIRLD YALFTAPSVV VQDGQRGYRN 240
  241 LFDAILDAVY AALEKAGGGS LEIVISESGW PSAGGTATTI DNARTYNANL IQHVKGGTPR 300
  301 KPGRAIETYI FAMFDENRKN PELEKHWGLF SPSKQPKYPI NFN

Type	Start	End	Confidence
Signal Peptide	1	33	0.96
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	343	0.99