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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38564743
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFPNLRFLL APFLYNVVVS GWQASAADDL SVLATETAKA NNDSLLWGPY KSNLYFGVRP  60
   61 RIANSLSAGL MWAKVDNYAT AQASFRHTCE QNEGMAGYGW DEYDIRKGGR QTIHDTGNSL 120
  121 DLTIDFIKVP GGQHGGSWAA RVRGIPREDG SPDQPTSIVF YATLEGLGNL GVATESGPIG 180
  181 YQGDVKLMGY TTELGDFSID VTAGPETNEH PEHGHPSYED KPLDRTLVSS STIAPENLWQ 240
  241 VKPIFFAQLK SEVNEMIQRF GQENPPPPAQ VFTIKNAPGD GNIHLIQKVF KGAFEFDILF 300
  301 NSGSSPDPVT SDKLTEVISS ASQSFSERFN KVLPPQSPFQ TAEYSEFSKA MLSNLVGGIG 360
  361 FFHGDDIVDR SAAPEYDEEN EGFWEETAEA RARAQPVHEG PKDLFTCVPS RPFFPRGFLW 420
  421 DEGFHLIPVI DWDTDLALEI VKSWLNLMDE DGWIAREQIL GAEARSKVPP EFTVQYPHYA 480
  481 NPPTLFMVLE AFLDKLEASK GAYSQNSGDQ EALDSLRMTY LQKPELGEAF IRSIYPLLKR 540
  541 HYFWYRTTQK GDIKSYDREA FSTKEAYRWR GRSVQHILTS GLDDYPRPQP PHPGELHVDL 600
  601 ISWMGMMTRA MRRIAEFVGE TEDVEEFRGY ETAIERNIDD LHWDEEAQTY CDATIDEFEE 660
  661 SVHVCHKGYI SLFPFLTGML GPDSPRLKAV LDLVRDPDEL WSDYGIRSLS KKDEFYGTAE 720
  721 NYWRSPIWMP INYLVVKNLY DIAMTSGPHQ EQAREMYSSL WKNLVENVFR QWKETGFAWE 780
  781 QYNPETGKGQ RTQHFTGWTS MVVKIMSMPD LPANKQIGHD EL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle