YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28396158
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRLVIFVLL AGLVALGSGI KLPASYSQCK TGDEPCVVQA ITNTFQKFQG GVPALGLASL  60
   61 DPLRIDEMDI VQGTGPVNIV LNFKNVDITG FKDVAVKKAK GFTETPNVME MNLRLPVASL 120
  121 VGSYKIKGKV LILPIQGEGT SNMTMVNCDF LMKWNGALEK RANGKEYYQM NKIKATFDTT 180
  181 RFYMHLTNLF NGDKALGDNM NQFLNDNWED ILKELKPAII GAFTKIFRAI ITNVFENVPY 240
  241 EELFLPNA

Type	Start	End	Confidence
Signal Peptide	1	19	0.96
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	248	0.99