YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38603916, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLEMNDLK KIGLGLTGFG VFFTFLGVIF VFDKGLIAMG NILFLAGVTL TIGINPAIQF  60
   61 FTKRQNFKGT ISFGLGFLLV VFGWPIFGLL LESYGFLVLF SGFWPTLAVF LQRIPLLGWL 120
  121 LQQPYIRSLL DRYRGRRVPV

Type	Start	End	Confidence
Cytoplasmic	1	11	0.94
Transmembrane Helix	12	32	0.94
Non-Cytoplasmic	33	36	0.85
Transmembrane Helix	37	58	0.89
Cytoplasmic	59	68	0.76
Transmembrane Helix	69	88	0.93
Non-Cytoplasmic	89	96	0.66
Transmembrane Helix	97	121	0.77
Cytoplasmic	122	140	0.91