YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30695110, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSISMALFSP PISSSLQNPN LIPKISTSLL STKRFSLISV PRASSDNGTT SPVVEIPKPA  60
   61 SVAVEEVPVK SPAESSSASE NGAVGGEATD SSTETVIKYQ NAKWVNGTWD LKQFEKDGKT 120
  121 DWDSVIVSEA KRRKWLEDNP ETTSNDELVV FDTSIIPWWA WMKRYHLPEA ELLNGRAAMI 180
  181 GFFMAYFVDS LTGVGLVDQM GNFFCKTLLF VAVAGVLFIR KNEDLDKLKD LFDETTLYDK 240
  241 QWQAAWKEPD SSTVSSKK

Type	Start	End	Confidence
Cytoplasmic	1	171	0.85
Transmembrane Helix	172	192	0.79
Non-Cytoplasmic	193	199	0.79
Transmembrane Helix	200	219	0.78
Cytoplasmic	220	258	0.83