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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37911994, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.93
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPGLKLYGA LILCVLVLPF SRPSSQVLDC REVRSSFQFL YPGMKWTPET PVSGSDLQVC  60
   61 QPKGLTCCSR KMEERYLLIA KQNMESSLQA TSAQLKGLII QNAALFQEAF DMVLRLGRNS 120
  121 TLMVLREEFP GLGAGASGAV TQLFLDMSLY ILGSDANVND MVSTFFSRLF PLTYRRLLGN 180
  181 GAVAGISEEC LRGAWKGSSA YGSFPKMMMT RLSRSLLATR VFLQALNLGI EVVNTTQHLR 240
  241 AGRDCGRSLL KLWYCPHCQS LLEARPCRPL CVSTMGACLG GTTEVQPHWR AYVDELGSLA 300
  301 AAMKGEQDIE AVVLRLHVII RQALKQAVAS KSKVSAQVSG MCVHAPPRVS RAVPVSAEHT 360
  361 SASTVNHNRP PMNFDPDETL FGRRREFISG LRGFSQFYSG LGEALCSKEP TSLNSSLCWN 420
  421 GQEMTDKFPG PGLKRVHPHG SESKQKTPEP VISQIIDKLK HINQLLRMVT LPEKRWRARQ 480
  481 GGGGARRNPS GPGQTDEDEE GLESGDCDDE DECTGVSGLG PPPRRKRLRI FADLADNLAI 540
  541 DDLTLHELLL TPRLATDAHG GSSIPGAAHV PTAAFIFTIT IIIFITLGLQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle