YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34394189, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MICLRAAFPL TSSFSSSPLR RLALKPSSSR AAAAAAMSSA PATAIAAPVE HIVLIKVRPE  60
   61 AAASGAAAAM VSSLQALSSV VPGLSYIHVG PVLRLRSPAA EALGPTHVLH SRYATKPDLA 120
  121 AYAAHPAHVA AVQGHVLPNA LDTTAIDWVN AALAPSPVTP GSAVRLTLAK VKEGVEVPQL 180
  181 VEKVAAATAA AGEAKGARVS FGENFSPARA KGYQFGMVAV FDSVEELDAV EGDGKVQEAK 240
  241 AAVRPLLDEV LVLDFVVGPA AVEAPAPANL

Type	Start	End	Confidence
Signal Peptide	1	46	0.99
N-region	1	37
H-region	38	43
C-region	44	46
Cleavage Site	46	47
Non-Cytoplasmic	47	270	0.99