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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33331379
Protein type: Globular with Signal Peptide
Type Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVSAWMLWV AWLCTCSKAV RQCACPPDEQ VAQRSEGKGH LRHRLMHQRA SHRDRAHRRK  60
   61 GSRLVSEINL PRIVHHPSDV VVRVGSPATL SCRAEGNPEP TIQWLRNGQP LDTDKMDAQS 120
  121 QPIVLPDGSL FFFSVVPGRK GQSHEAVYAC IAHNSIGNAT SRNASLHIAA LREDFRVQPS 180
  181 DVEVAIGEMA TINCSPPVGH PEPNVTWRKD GILINSSNEH YTELKGKLII APAQKNDSGV 240
  241 YSCIASNMIG VRESRAARLS VLAKPVLLRK PEDVSVQLGE SAQFFCEADG DPMPSIEWSR 300
  301 EQGPLPNGRY LINPDHSLQI HYVTAQDMGR YSCTVENKLG VSVASAQLLV EDAGGTRLRD 360
  361 LHKELSALRV SLENVTVMST ASNMSQVMWK LQSFGSQPHY LEGFEVLYRS LLPASSDWTA 420
  421 QRVPQPSLHT HVGPLKRGYK YEFKVRPYGS SLYGRESNTR HLRVPEIVPS AAPQDVSITM 480
  481 PAERNDTVHL SWEPPPHDAH NGIIQGYQVW CVESEEQTSF NWTVDSGTHS IEIVTLLPSR 540
  541 LYWVSVAAVN GAGVGVQSDP YKLLIESRLE ATPYQTGILS MSHFVSVIKE PVFIGSVGTL 600
  601 LWCVLMITAV FLYRRHIRPA NPGGKSSGLY RLESEDLIIK HRMAAPDSPW ISGGWRPGSN 660
  661 SEPKQGLWTP SQENSGLRRT TLPITAKKDP NPLPSAVPIV PDNCGVYGTF YVDLTGNGLK 720
  721 TFNSPGRCPR MPHGNSQLQN SETIRITEPI VKTAVVRELQ ALPWKRTLPA QPNMGVKKES 780
  781 WEKNVKRELH AVKSAPLMPL NQQALAVCSA PNHQQRFSQH PAGGVSEPVK PLSSPRILHY 840
  841 SASLQLVDML PSPPPLPMED NHSLSSEDES TRSTKLTVDI GSQQSVCAAS GLQGPASANT 900
  901 GCPNNHSPAQ LSPSYSHLST ASFCLSTDDY QDTTLSTQGH TQYMEISPKP QGQSTSHQST 960
  961 PSMPRPFSPT PTLGYICGPG DREMDEEQET VPIGLRRATL RSTPSSYCSE WEGSLWNGWG1020
 1021 SVSESNVTSA RTSIISSSDC SFINDANFAR VLALTAESMS GNLSDFSPPA SPLSVLFPPR1080
 1081 ECFGEVEPLP VWDWSTAWVE ELEAQFKASR DPRRPARNSG IERWRGHLES PSHR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle