YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TLP11_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLRSLILEM RSRPHRVVHD LAAAAAADST SVSSQDYRWS EIPEELLREI LIRVEAADGG  60
   61 GWPSRRSVVA CAGVCRGWRL LMNETVVVPE ISSKLTFPIS LKQPGPRDSL VQCFIKRNRI 120
  121 TQSYHLYLGL TNSLTDDGKF LLAACKLKHT TCTDYIISLR SDDMSRRSQA YVGKVRSNFL 180
  181 GTKFTVFDGN LLPSTGAAKL RKSRSYNPAK VSAKVPLGSY PVAHITYELN VLGSRGPRKM 240
  241 QCLMDTIPTS TMEPQGVASE PSEFPLLGTR STLSRSQSKP LRSSSSHLKE TPLVLSNKTP 300
  301 RWHEQLRCWC LNFHGRVTVA SVKNFQLVAA GASCGSGTGM SPERQSERII LQFGKVGKDM 360
  361 FTMDYGYPIS AFQAFAICLS SFETRIACE

Type	Start	End	Confidence
Signal Peptide	1	34	0.72
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	389	0.99