YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38512101
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTWLKTVFG VTTLVALALV VICIVLRPSR VYSPEGNTGR SLTLKDILNG TFSYKTYFPN  60
   61 WISEQEYLHQ SEDDNIVFYN IETRESYIIL SNSTMKSVNA TDYGLSPDRQ FIYLESDYSK 120
  121 LWRYSYTATY YIYDLQNGEF VRGYELPRPI QYLCWSPVGS KLAYVYQNNI YLKQRPGDPP 180
  181 FQITYTGREN RIFNGIPDWV YEEEMLATKY ALWWSPDGKY LAYVEFNDSD IPIIAYSYYG 240
  241 DGQYPRTINI PYPKAGAKNP IVRVFIVDTI YPHHVGPIEV PVPEMIASSD YYFTWLTWVT 300
  301 NERVCLQWLK RVQNVSVLSI CDFGEDWHAW DCPKNQEHIE ESRTGWAGGV

Type	Start	End	Confidence
Signal Peptide	1	28	0.78
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	350	0.98