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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38482511
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AFRDKQGGFV VLARLSTDQA LIQSPNAVSP EILPINELEA RWSGEVIRLG EASLRFDVSW  60
   61 FIPAFIHHRR LLGEVLLFSL MLQLLALVTP LFFQVVMDKV LVHKALSTLD VLVIVLVVVG 120
  121 LFEVVLRGLR EYLFAHTANR IDITLGIKLF RHLLGLPLLY FKHRQVGAII TRVQELDNIR 180
  181 DFLTGSMLTL CVDLASAFVF FGVMAWLSPS LTCVVLAILP LYFLLAWFSS KPLQQRIEQQ 240
  241 FQTAALNTSF LNESVSGAET IKSLAVEPRM QRRWESQTAN MVEAGFRTQT LNSFISHGVM 300
  301 LLQKTTGVGI IWLGANMVIS LELTIGQLIA FNMMVSHTNQ PIAKLIDLWQ QFVQTRVAVD 360
  361 KLGDILNLPV EQEQGNIRPQ QPLSGDLQIR NLVFRYQPHQ APVLQRITLH IRSGENLGIV 420
  421 GPSGSGKSTL TRLLQKLYAP DEGEILIDGI PLHQLDPGYL RGQIGVVLQE NYLFNRSVRH 480
  481 NIALKDPSAS LEKVMTVAKL AGAHDFILQL PLGYDTVLAE AGSSLSGGQR QRIAIARALM 540
  541 ANPKILIFDE ATSALDDESQ ALIQANMAEI ALGRTVIIIA HRLSTVRHCD RIITLEQGLI 600
  601 TESGNHHQLL AKEGCYARLW QIQQELRKET A

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle