YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30262502, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVLKNKKML KIGMCVGILG LSITSLVTFT GGALQVEAKE KTGQVKHKNQ ATHKEFSQLE  60
   61 KKFDARLGVY AIDTGTNQTI AYRPNERFAF ASTYKALAAG VLLQQNSTKK LDEVITYTKE 120
  121 DLVDYSPVTE KHVDTGMTLG EIAEAAVRYS DNTAGNILFH KIGGPKGYEK ALRQMGDRVT 180
  181 MSDRFETELN EAIPGDIRDT STAKAIATNL KAFTAGNALP NHKRNILTKW MKGNATGDKL 240
  241 IRAGVPTNWV VADKSGAGSY GTRNDIAIVW PPNRAPIIIA ILSSKDEKGA TYDNQLIAEA 300
  301 AEVIVNAFR

Type	Start	End	Confidence
Signal Peptide	1	33	0.75
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	309	0.99