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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38350549
Protein type: Transmembrane
Type Confidence: 0.72
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVSSRARWV ALGLGVLGLL CAALGVIMIL MVPSLIKQQV LKNVRIDPSS LSFGMWKEIP  60
   61 VPFYLSVYFF EVVNPSEVLN GQKPVVRERG PYVIREFRQK VNITFNDNDT VPYIENRSLR 120
  121 FQPDRSQGSE SDYIVLPNIL VLGGAVMMED KPTSLKLLMT LGLVTMGQRA FMNRTVGEIL 180
  181 WGYEDPFVNF LSKYFPGMFP IKGKFGLFVG MNDSSSGVFT VFTGVQNFSK IHLVDKWNGL 240
  241 SEVNYWHSEQ CNMINGTAGQ MWAPFMTPES SLEFFSPEAC RSMKLTYQES RVFEGIPTYR 300
  301 FTAPDTLFAN GSVYPPNEGF CPCRESGIQN VSTCRFGAPL FLSQPHFYNA DPVLSEAVLG 360
  361 LNPDPKEHSL FLDIHPVTGI PMNCSVKMQL SLYIKSVKGV GQTGKIEPVV LPLLWFEQSG 420
  421 MMGGKTLNTF YTQLVLMPQV LHYAQYVLLG LGGLLLLVPI IYQLRSQEKC FLFWSGSKKG 480
  481 SQDKEAMQAY SESLMSPAAK GTVLQEAKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle