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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7209577, gi|2...
Protein type: Globular with Signal Peptide
Type Confidence: 0.33
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIAGFCALS LIQDHCCWTT PQHCSVAELG TMPCPTQVSG RCVATTAAVL AGGALIGYLV  60
   61 GYKFGQRSAR CNYKIQLDSN KIVDTVDIED IGEKKAFCRC WKSEKWPYCD GSHGKHNKET 120
  121 GDNVGPLIVK SEKNLYIYII ISDFYNNHTN DLKHQIAQLE RKTATIPKLE NQLHKAKNQN 180
  181 KVLRRESALF PSASCADVSR VEDQKVKTLR NELADLKLKL RQLEDDNKEK DMENDRLIQE 240
  241 NRTLKREKLK LINCFKTQMA EKDAIIRELN DEVVDLRGQI RVAIRVRDFE RDGSSNFSII 300
  301 SQNEVQLQQT TGQSNTYSFE HVFFPPTAQS GVFGEIKELI MCALHGKNVC LIAYGPTGSG 360
  361 KTFTMRGEDS ADSEGVIPRA IRFMLEQSKR DLAMIGWNYK FQASFIEVYN EEVYDLLDGK 420
  421 QKLEVKINGS KTNVVGLKKI EIGNISDVDV ILNLADSQRS VASTASNEHS SRSHAIFQIF 480
  481 VDGQNASGEM VQCCLNLVDL AGSERAKETQ ARGKQFTELT NINQSLSTLK KCIRRQMTKM 540
  541 SHVPYRDSKL TMVLREYLGA GTSKTMFIAH ANPRDVAETK RTLEFTSELR STNLGKAVVQ 600
  601 TGQKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle