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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YK213_PLAF7
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWEHYKYINI YIYIYIYIYI YIYMCLYIYI CVYIYIYVFI YIYMCLYIYI FFFFVLLLRN  60
   61 IKKVNDPDSY KTSYERKEKD STFDEEENFD ILNIFSNDPK SVENIYELEN DIYNKSEESS 120
  121 ICSNHNKNLD EKTYKINKKK VTIYLKLNEG LENIKQELHI IDRELKNILQ KEENLQLINE 180
  181 EENIIIEKTK SDKYDEKENK SNDNILSKKH DDENINKSDI RNTLDSELKK KYELCKENNQ 240
  241 LLENHHNNDN NQEDNNICEI EKQDYNNYNS DNKNHNDIFN YNYEDISLEK DKNIHHTKEI 300
  301 TKNDTLCNTL DSIKNNRPTE EKTKNFNYNE TNIYEENKKL KDSIVNSKNG ENFLLKNNEQ 360
  361 NINNNIINVN QKQSSDHKKE SFKIDTKKND QIEQNYQNGK NEKNEENEKN GMNEQNGKNE 420
  421 QNGKNEQNGK NEQNEQNDQI EQNYQNDPND QNDQNDQNEK NDQNEKNDQN KKNEQNIGPK 480
  481 KTNEISYDSI NINISNNQNP KLSNVFVEDI KRILPISNNN LENSITTIKN IDDPSNSTKQ 540
  541 ELQNSDYENM HANKKIENGK ESFICDITSN TNITRNSMDI PNIMDRKKSE YDKEVDNVSI 600
  601 KKKSYINHNM QRENTREDPS NNMDYTNKST SDSNDIENEN KMERCTNILG LDKRETVIKI 660
  661 NDINKDNKHT NGIKCEDKRK STSIHMEDIN NSTNYLNNKE YNSKGENNNN ILGDDKREST 720
  721 FKIYDIQKSE YNSNDLQYDN KRERTSINLD NGNKNNVDIN NYINVDDTKE RISINLDNVN 780
  781 KNNVDINNYI NDDNTKERTS INLDNGNKNN VDINNYINDD NTKERTSINL DNGNKNNVDI 840
  841 NNYINDDNTK ERTSINLDNG NKNNVDINNY INVDNTKERT SINLDNGNKK NVDINNYIND 900
  901 DNTKERTSIN LDNGNKNNVD INNCINVEDK RERYSHILNI NKRESIIKIN DMKKTKSDSN 960
  961 DIKINDNRTE MYSNIFEINE KERTSIKVDT VKENKSDSND IENGNKIERH SNVLYINPTK1020
 1021 FDPIKINDIN KKGERYYDNI ENEDKREIYT NNDEYMDKRE SNTNHIYINK KESYLENAKD1080
 1081 VIKKESPLNN VEDTKKEESY SKNIENANKE EYESNEETYV NKMEEDSNDI EDISNRKYEY1140
 1141 KEGQYLNKGE KYINNIDNVS IKESYYNKRE KESIEISNLN KRESCTSNIN NFRIRENQSN1200
 1201 MVEYENKRKS DNIEINNLNK ADIYVNSIKN VSKRNSSYNK KERDSKKDRD SVYDENRRKS1260
 1261 SAYQINDIYN IRDKSKEKID MDTIQDMNKR KSYVDNIHIT NKKYSDINNA EDVIREKKYE1320
 1321 DYNISVMYNM HNKRDQRKES NINIYNDNNM RRSTINKIND ENSMHNVKNE IKNIDNNNNV1380
 1381 DKINVNKSNT DKIYMDKIYM DKIYMDKRYM DKRYMDKRYM NKRYMDKIYM DKIYMDKIYM1440
 1441 DKIYMDNEYM TDNIIKKNDK YNNNNNNNNS DVVEYVNERK HTSLINEHYL YERKSNVDKM1500
 1501 KDINKGENDI LYDVYNNSEK KNTKSSLYRN PEIITQGGND NINNMNEHIS SLNKVYRISN1560
 1561 KKSNNNYKGQ DYTYIVNENS GRNSSMYNNI NNSDNMNKKE CDFINDKENI NKRISEIYDL1620
 1621 RQINHNESNI ENMENIKNME NIKNMENIKN MENIEHIKNM ENMEHIKNIQ NIEHIKNIEN1680
 1681 IQNIQNMEHI KNIESIQNIQ NMEHIQNIEN IQNIENIQNI ENIKTIENIK KNIENINNKG1740
 1741 SLMVNSNNIN ENIKKESDIY KIECDDDHMC DVTKIKGVDK QMSDTHKIKY DDNEKNNENK1800
 1801 RKSGINKVFD IIKRTMDSYN IYNLSKCKID EDNIYMLNEK KKNNINNMNK RKSENTYNIN1860
 1861 EREKDDMNRR MTENTYNLNK EKNLSVHNIK NIQPYNINNN IYEKTNDTID NLNETGKNNT1920
 1921 NDISIKGSDK NKEYKFYDNE NKDNINMIIR DTINMSNLNN NISDNMQMAI HKEEKNIHKM1980
 1981 NRKITYTNNL YNINESKTEY TININEQEEK SDFINNDNIK MDNEDKLYNC NERNNHIHKE2040
 2041 NKRNDIKYDN FKKDNIRKNM DNTKNIENMN NIDNMDNTKH IENVNNMKNI ENVNNINNID2100
 2101 NMDNKKHIEN VNNMKNIENV NNINNIDNMD NKKHIENINN MKNMENMNNI NNIENMNNMK2160
 2161 NIENMNNMKN IENMNNINNI ENINNMKNIQ NINNIENMDN MNNTKYIENM DNMNNIENMN2220
 2221 NINNYNKIYD VNIINNKNYD STYNELYEKD NQEENKNICN DKLDNSINEK TKYMKTLREY2280
 2281 FVKSEKEIED QKKNNMNDMY TRREEEKIKD NEDWKLYDFK NLKEKYKFQM NMKDSEINQL2340
 2341 QNNLIDEFKE LNEVSKLKNN LKGKTYNSNI GEEMLEENKE KQHGNYVGEY FDRNDMILKE2400
 2401 RIFEYAKHKT SIDMLKHPDD IKRNSKDLKK WKSQVITKKY ADDWLSSDVL LSCFLNFIKL2460
 2461 KKYVNITELS VKFQTTTDDI REKLEELEEQ DMINGVLDEK GNYIYLSQEE INKLCFEIQS2520
 2521 KGKVNTHDDF VKICNKVISL SVNDKVKKKN RHVTIYIYIY IYIYIYTYIY AYIYTYIYTY2580
 2581 IYMMFFFDVF KGVIFINFSY IFIGHGKVKG RRRKNN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle