YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23497842, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMYYLKMLL FTFLINTLIL PHYENYLNND YNVSFIQNKT KRATIKSRLL AQTQIHNPHY  60
   61 HNDPELKEII DKMNEEAIKK YQETHDPYKQ LKEVVEKNGT KYTGGNDAEP MSTLEKELLE 120
  121 TYEEIFGNES DMLKSGMSPN VDEKSSTCEC TDINNIKLGK TKGRDKYLKH LKHRCIGGIC 180
  181 SCTLGSALLA YIGTVAAKVA VIGSFGDTVK NCISSISILH MLTYDSMNLA MQSVNAAGSV 240
  241 TCVSDLAGAT GTAYAIFVPC GITALVLLIL AVVLIIIYIW LYRRRKRSWK HECKKHLCK

Type	Start	End	Confidence
Cytoplasmic	1	174	0.96
Transmembrane Helix	175	195	0.89
Non-Cytoplasmic	196	254	0.72
Transmembrane Helix	255	282	0.86
Cytoplasmic	283	299	0.99