YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23509675, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKYREFADA STGINPFLPV WVNKKLSFQE KLLKLLLFPI VVMRLCFLSL TLIFMFFLNS  60
   61 LLKILIFQCI KDFFYQIIQT IYCRLLLFYL GFLYLDEQYA NNKRVKIKCT KQKIPFTYDT 120
  121 YGHIFLSNFT SFVDILYLSF RLNPLFIVIN KNGSLSPVCF YDLIKLSLKF SIPNKMGIFK 180
  181 NIEQIHNYAR THKIKNVVIF PEAMKSNGSC ILLWKNDIFQ NSDLVLRNKC NIITFIYDEI 240
  241 NIINKKLNHF YTSPHTVFHP FIHITFLCFN IYNKIKIVWI SEKDISQAIK EQSFKNNDEF 300
  301 VYYLRNIMGQ MKPTGGTLVN VKSEMLEKFV NYWNMTRKKA YL

Type	Start	End	Confidence
Cytoplasmic	1	34	0.92
Transmembrane Helix	35	58	0.86
Non-Cytoplasmic	59	342	0.69