YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20429031
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKSDVVLLL YILIINLICC LNGNSKKRAY ILNTPKSSNC KRSSFRRWNN PVNNNNSQIL  60
   61 SKNEGSIEDV YNKKISGRCN IKNFSKDINN NIYIETNRRE RRIKRNKYLL SLYNNTNIKT 120
  121 SNFIYPLFIH EEDVEKKHTQ LEGIYTYNVD GIIKEIEECI KLNIHHFMFF PVIREENKTV 180
  181 YCEESYNENS YFCKTISRIK EKFSDDIIVY TDVALDPYNI YGHDGIYDDN KKEILNDITV 240
  241 HTLVKQSLCL AKSGADVVCP SDSMDKRIEL IRKNLDFHNF RDILILSYTC KYSSSMYKPF 300
  301 RSILNSNILK NFVKNKQSYQ HDFNSYMDLN NVDKHIIEGA DIIMVKPSMF YLDIIHKIKN 360
  361 RIKDDVQIPI AVYNVSGEYM MIKNYVKYLN EDINYENEII TELFKSYLRA GANIIITYFA 420
  421 KQYGLYMKKL YDKNIIIDDN SNNNFNIELT L

Type	Start	End	Confidence
Signal Peptide	1	20	0.75
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	451	0.98