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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23497111, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYSSNDDIP LDNRKDVIFN NAEKKNINFD KRRSCDYEYD EEENDKIIND ERIMSGGEEK  60
   61 IYMSNIEGKE KNNLNDSNIL DKGRSRSSSN NVFKNIDKEN DRKKNDDIKD KEESNNIIEE 120
  121 KDYYVMDKQM NISNTHKIDV ENEKIKNIHF SMNNEESNID DENKKENIFD IKKSISSYGN 180
  181 IKNTSDSHKK GSVHKSETEK KDMNPIYDDN NYVWDKNDEN MKYGKNHINN NNNNNNVKNN 240
  241 DNNMYYENDE KFYKREYIST DEHMKVDKEI VEIKDEKKEQ KKPSILNKEE NGKKNKDHVI 300
  301 HNVEEAPGYE YSHNIIYHEL YVELLHVNKN LQNEIKNLKK IIEMQKILIK SKEEVFLDHL 360
  361 NEKNKMSNKK LMNHNYFLNF FNKKKKKSKE YKTSFKEEYE EEEDDEDIGY VVDRKKQTYF 420
  421 DVNKNYHGGK RELEEEIHNV SEEHFDKKGS YLECEKIYND DEDMFEYDMD VIYEKEENKN 480
  481 NKYIKLPSID NNDFSEMTDR DIDSLYAYNN NNNNNNRNHN KNNNNSNNNS NIINIEKNDV 540
  541 YFFNDEKEES NYSRKYEFEQ SMLYNIEVED ESCNNSMTIQ EITCLTFWYE EILPLVNNDK 600
  601 KKNLLINRMI TNYMPNSIKG YFWEMCIKNK LNLTEYFVQI LIKNTNFIQA YVYTNNRQYH 660
  661 NHVSRYFKSL IELRNNNLHI KEETIENDQD IEQKHDDNNI IFDSNKFHIN DVHDKFDEQN 720
  721 DNIFYETQNM FDHKNKDPSD NKNDNPSDNK KDNPSDNKKD NPSDNKKDNP YDNKKDNPSD 780
  781 NKKDNPYDNK KDNPSDNKKD NPYDNKKDNP SDNKKDNPYD NKKDNPYDNK KDNPYDNKKD 840
  841 NPYDNKKDNP YDNKKDNPYD NKKDNPYDNK KDENFCDDKN VIIYDNNKDK MSNMPNSNAN 900
  901 INLLQKFSVQ KFFYQILIDL DRTMYIITKN KEYFAKYNIQ TDNVLSSVNL SDMKKKLNTL 960
  961 LQMYVLFKPE LGYAKANTLK KKKNIYIYIY NRGVIYFFFL CPYVNIYLYI YVFFFFFFFF1020
 1021 YSYVQGMSYI ALVFLLYSNL EKAFVHFANF MVNLLSLVFL HTYVHVLTFF FHIKYILPFY1080
 1081 FFIYPFMFTG KERYL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle