YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23508203, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSYFNILL FSIPLNILIN DQRNHKSTTH HTLKIPITRL LCECELYSPD NYDNDAEMKR  60
   61 VMQQFEDRTS QRFHEYDERM QSKRMQCKDR CDKEIQKIIL KDKIEKELSQ HLSTLETNID 120
  121 TNDIPTCVCE KSLADKVEKG CLRCGYGLGT VAPTVGLIGA VAVNELKKAA MAIAIKDAIA 180
  181 EGLVAGETAR IQASIKAVIL GIKSKFRIDT LGGEVLESII TAQKYDDVSL ISESIYMQYQ 240
  241 STCLPQYVGH GADLSKPICH TVYTLDFVQG KVHVPGSLQG SIKKALEKIV AEAKSNAVSE 300
  301 TANVTTRQTA VFESRNIAAV DATYASYQTA IVASVVAILV IVLVMLIIYL ILRYRRKKKM 360
  361 KKKLQYIKLL KE

Type	Start	End	Confidence
Non-Cytoplasmic	1	329	0.97
Transmembrane Helix	330	352	0.94
Cytoplasmic	353	372	0.97