YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|507789
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSFINITLS LFLLHLYIYI NNVASKEIVK KYNLNLRNAI LNNNSQIENE ENVNTTITGN  60
   61 DFSGGEFLWP GYTEELKAKK ASEDAEKAAN DAENASKEAE EAAKEAVNLK ESDKSYTKAK 120
  121 EACTAASKAK KAVETALKAK DDAEKSSKAD SISTKTKEYA EKAKNAYEKA KNAYQKANQA 180
  181 VLKAKEASSY DYILGWEFGG GVPEHKKEEN MLSHLYVSSK DKENISKEND DVLDEKEEEA 240
  241 EETEEEELEE KNEEETESEI SEDEEEEEEE EEKEEENDKK KEQEKEQSNE NNDQKKDMEA 300
  301 QNLISKNQNN NEKNVKEAAE SIMKTLAGLI KGNNQIDSTL KDLVEELSKY FKNH

Type	Start	End	Confidence
Signal Peptide	1	25	0.51
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	354	0.99