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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|124802471, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNIVLFYIF NFIVFLQWVP LSNPYISVFF RLYIYIYIYF FILSIIYIYI YIYIYIYFHF  60
   61 VYYIYIYIFF FFFFFFFFHF TFVMMIIRGE LPSKGYLSPS DKKCANTFLQ QEEEDEEVNK 120
  121 EFYNKIGDII EYIDTSRNKI LLIQSENLTK RKEVTNEYDF LKKVGEVCKK SCDYYFDTNI 180
  181 KYHEACENFS ILFKIFYDSL IYIVKKNEEA DHVQTILQQI EDNISMEKLE KEKMNILLKD 240
  241 KLNELEKNVF FMKNESVNLN NKIQELDYQI NQHKESFDSF STLTNLNCEK LIVLQNQYNS 300
  301 LTNKRESITR SIAKKGDTME MCKYNFVQQK KKLEEEKNEL MVKEKEYTHK IEHLEICRQE 360
  361 ICSNNTRLQS QVQFVESQVN SQEYYEKIIE EGLSNSMDTK KEIEENLSTH KNEINKIIEK 420
  421 IKKCKLEKKK GNEKYNELQK KFGELQKELE KKENDALEFK KKYNDINEHV KNEEYTLNQY 480
  481 ILQDLKKKKN LLQEEITNYK EEIKTLILKE KEKKLNNHQY NNINHIDIKD DIDTYIDSVE 540
  541 TNLLIQELEY ILNEMKKKIK EEEEEIWKKN RELQNENIKI NELQNKINEE YNKEKEINSE 600
  601 VQVIQEKLII LDNKEKQNQQ NINHLKEEIN SMELKNNKNK EEIQHLENKI NENKQKIENH 660
  661 ILQIHKEYEQ KNKILYETNN FYTDINSKEK KQLKDDIDTY TQQIKIQYDL QKEKIEKQEK 720
  721 QKVDEEFKYL DQEIKKKDDL LNYYKELLNK QENNTNVNII NYAQPDNEQP TQEINPYEDI 780
  781 KENRKSIQNK KMNSSNTYNN FNKYKLYTMP DQYKIGYFDV TSPNDMRRKS IKYQNRSVKS 840
  841 PHITRLLEKI KNRKECHTLV ASKKTPLTQA NSINEKDNNR KSSNHKALTK TKKNQNDNSF 900
  901 DLFQHFEAEE ILNRIKNHKG VIGILVVNSE GLIIKSTFDQ QQSDLHASLL TQLSKKARDV 960
  961 IRELDPQNDI NFLRLRSKKH EIMIAPDKDY TLIVVQDPYA DKEKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle