YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52076606, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSLSSSTA SAAACCKSRS RNPPPAPAPH TSTARVVRSS RRRLLLVFFS AEAAAAATSG  60
   61 LIQTPCGQAY PFAGTNVKKP QPPSTPYSQS QSQQQFGLDA KGRIRACPST NPGCVSTNPT 120
  121 VGASCSLASP LIVPANTPTD KAAASLREAI LKTQRNAVIK ADEETAYGHY IQAEVDGGAG 180
  181 RDVMEFLLKE SQSQSQEVVA AYRCVATKVI FVYPFTTAVG DSRGQSQRIA AVAQELGWYA 240
  241 PDLLNAATAD DHSILDY

Type	Start	End	Confidence
Signal Peptide	1	56	0.92
N-region	1	47
H-region	48	53
C-region	54	56
Cleavage Site	56	57
Non-Cytoplasmic	57	257	0.99