YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|124801483, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGYSNNKFNI FTLWNNIILY FILIVTFTFY NKDLFNKYNG EKSNIGASFN FGNNRSLAEY  60
   61 YNNKDGYNVL RVNLDHKNLK DVLGNMHPEI KMVEVDSESV CPGTNEVNLK VVTNIPPDMI 120
  121 KVNATSENMS VGQWDYIMQY YGQSTPKEVS KLDSEVKDKI EKKIKKKKRK TPLIRYIAEL 180
  181 VGYGIIFIPG FPVLVGIVSV GFCILIFMGK KSAKNYFSTI KKWLF

Type	Start	End	Confidence
Cytoplasmic	1	9	0.50
Transmembrane Helix	10	30	0.87
Non-Cytoplasmic	31	182	0.51
Transmembrane Helix	183	209	0.84
Cytoplasmic	210	225	0.68