YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7452513
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSRFLLLS IFFCFVTNIS LEFKRKQKVE INSLQTNKNN DNIREEKIKG DVESQPDVDG  60
   61 DTCVIFSSSE GNSRNCWCPR GYILCSEEDV LDVQGKLNEI KNKHERSLVT PLWMKRLCDN 120
  121 SNDVGFKSMS VVIDYELAVL CKDGSNKDYA DFEIIGASGY ITGEEMIEEQ KRNPWYVPRK 180
  181 CTVNNFYLCR KVENDNVNCS YTPWSDWSAC KNNTQKRYRK VRRSNQNNEN FCLWNDKIVP 240
  241 RNIMEQTRSC

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	250	0.99