YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7494378
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGKGSFFFC WIFLISFLYL INVIVCKQTI LKLSYQINSF NSDAKKKEWT NIGSFILNSI  60
   61 KIYDISNTYV EEKRKFLEKM KNVELHFDYV LFQLCYDESK CLETYVNKEN IKNINNFVFL 120
  121 LGLDNNYTPF ILNYKIYNHE ELYNQKINKY NNEIIYSNLF IIKFPTVSTP ININNITTED 180
  181 IHMKPKTQKN EKINDQNQPK SFLRKYWFII LIFFLSFSFS KHLTENEPQP PDNTS

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.50
Transmembrane Helix	7	26	0.90
Cytoplasmic	27	205	0.54
Transmembrane Helix	206	223	0.63
Non-Cytoplasmic	224	235	0.79