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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|16804969, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSISLFLI LCVLFCKNDI KCTTVDESTK EGSQNPKNSS STTPASGSQK GSSSESPGSS  60
   61 VEKQSQESNK ESTNGGNVVS QGTPANTFGQ NSNNPSDSPQ GTSTLPSPPK SIDVKSAFLK 120
  121 HYKGVKVTGS CNANFQLFLV PHIFINVETK ENNIQLDVKF LKLTKRIDFA KDKSMLKNKC 180
  181 ESGKNQTFKF VLYFKDDILT IKWKVYEEKS ATPQKSEENT VDIKLYKLPK LDQTITSIQV 240
  241 HTLSIEGTSY LMESKDYSLG NNLPEKCDAI ASDCFLSGNI NVEKCLKCTL KVKKVEASDE 300
  301 CYKYVSKDKP KETKLAVSGS EVKEVKAASV DHSNDKEYEL SQSINNILNK MYKKESNDEK 360
  361 NNKKELIKLE DADDSLQKEL NKYCNSLKEV DLNGVLSKNE VGNEKDVFNN LTTLLKEHML 420
  421 ESHHVVFEKL KNSALCLKNI DDWLKNKNGL IVPPSKYKLK DTNEKKELNN NVEVIEDMFK 480
  481 ANEHGIVDLT KFPIDTNYSS YKHIDHTYCN NDYCNWSKDK NSCISKINVE DQKNCALSWA 540
  541 FASKYHLETI KCMKGYEHIP ISSLYIANCS KNEKKDVCTE GSNPLKVLQM IVEKGFLPTE 600
  601 GDYSYEQSKV GETCPEVQNG WVNLWANAKL LEQNNDEHNS LSTKGYTAYE SEAFQKDMHS 660
  661 FVKLIKDEIM NKGSVIAYVK ADKIMAYEFN GKKVQNLCGD KTPDHAVNII GYGNYINDEH 720
  721 QKKSYWIVRN SWGKHWGDKG HFKVDMYGPS DCEDNFIHSV VIFNVDLPIN QESVKKEPKI 780
  781 YNYYLKASPD FYHNLYYKNF DSQKGKADQA ENKKSYLYGQ EESTSEQLPS SLSSPQNNKQ 840
  841 SERSKEKVDI FHVLKHIKDS KIKMGIVKYD HSDALGEDNV CSRSYSSNPE KQEGCVKFCN 900
  901 ENWGKCKDAA SPGFCLSELE KTNDCFFCYI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle