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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3845155, gi|1...
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVYRLFIILV LYVICCTNVI VGQEKPPPDS TVGANPGDER ESSGRVNNPA SGEQGTTNSP  60
   61 TEQPDQTRDR SSSVPQGSPR EPVSPENPNP VTQIPGNGGA LVTPIPLPKL TLEDSESSKS 120
  121 VIDIEVKSAL LKNYDGVKIT GPCRSYFRVM LVPHITVYVY ATYDRIQLEP KFGPSDLIDI 180
  181 NDLTNKCNKD SNKYFKLVLY IKNNILILKW KVQDKDSKPT NIDVDVKKYK IPKLDRPFTS 240
  241 IQVYTVNTEH GLIESKNYDI NSEIPEQCEA ISTNCFLNGS LDVENCYHCT LLAKKVDSNN 300
  301 ECFNYVSKEA KELINKNLEE KNKTFKGEDE DLDSNEQKLE ESIDNILSNI YKIYESKQDK 360
  361 ERKKSHYNNK KELVTIEELN SVLKIELLNY CKLLKEVDRS GMLDHHEIGN EIDIFNNLIR 420
  421 LLKAHPGEST YVLNEKLRNP ALCFKNIEEW LVNKKGLLLS NEKIQNLSTT NYNVTDLEES 480
  481 EYDYERFISD DMFEKDMNGV IDLSLFDNEK KLKSPYFRRN KYCNNEYCDR WKDKTGCISK 540
  541 IEVEEQGNCG LCWIFASKLH FETIRCMRGY GHFRSSALYV ANCSDRDSDE ICFVGSNPVE 600
  601 FLEIVEETGF LPLESDVPYY YTDAGNDCPE PEKNWINLWG STELLNHKRP RQRMTTKGYI 660
  661 SYESSYFSDN MDLFIKIIKR EIQNKGSVIA YIKTENVIDF DFNGKGVHNM CGDKEPDHAA 720
  721 NIIGYGNYID EEGEKKSYWL IRNSWGYYWG DEGNFRVDMY GPSYCKYNFI HTVVVFKVDL 780
  781 GIIEVPKKEK ESEYFSYFLK YTPNFLYNLF FNNYTTNDEY KLNNRLKTNQ HNNKKNKKDR 840
  841 YISAQDEPPT DNVESQAENN KKTEIYHILK HIKDKKIKRG LVKYESLLET KKDHSCSRTH 900
  901 SIDPEKHEEC NQFCIDNWKA CKDHYSPGYC LTKLYTKDDN CFFCNV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle