YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7459948
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.30
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLSKILYFF AALLALNFIA PRDYNSMVEA KPAKKLTPAE RKKRNQNIMI YSSIASAVAL  60
   61 LIGGAVGLGI HLHKNNKGDN KKGTPGAKKN DNKAVNPSIS STMYRA

Type	Start	End	Confidence
Non-Cytoplasmic	1	5	0.30
Transmembrane Helix	6	26	0.40
Cytoplasmic	27	47	0.53
Transmembrane Helix	48	70	0.73
Non-Cytoplasmic	71	106	0.73