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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7494164
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATIKKYHIR GRKNILIFLL KIFLFSPLIW ILIYSEYFTV VKNYNKIDNV YNIFEIRLKR  60
   61 SLAQVLGNTR LSSRGVRDPR TKEALKEKQF RDHKRKEALK QKTEKNEKAR NALKEKKLKE 120
  121 QKKNDAQKAK DLTKKESQDS SSEKSLKEKV NGEALKEKEN KETLKKKELE NQKEKEEKNK 180
  181 IKDNNDEALK NKGNDKDDKK IVPKKPESVE KDLKEMELKE KEFIKQHLKD YEERKEKRRN 240
  241 WILRSLRRDK LREIEQLEKL NAQLESAINE LKERRASRRP MMVKMQRGMK DEVDEWIKKY 300
  301 DDEQAEKNGT KDEEIKDKGD GYEEIVETKF YGMRENALGE LDEYEERYEK KRYYLKEDGE 360
  361 GDLKDVEEKL EETGYGFREK FPTTRILVKR KRNKEQKKLK EDKEKKLIAA EEPDDEKKIK 420
  421 LKDSDDKVVV PVNKNKSSFP DKFRAPDKKR TMFYRLSELF PIVPRKDNEL AVSGDCMDSK 480
  481 VNGKKLKSTF NPFKRRRNKL KERKMQELHK FKKNYKKYQK LLEREKRENP DGEPLNTPEI 540
  541 HVIRPSDLMD KGENKSAGHP FKYQPTKGLK EYEESHVAKD YQLEHEPPTK LPEYEKGHVS 600
  601 REYQLDNEVR DELPEYEKGH VSREYQLDNE VRDELPEYEK GHVSREYQLD NEGPSTLKEY 660
  661 DQTELAKGKD ITNKPHESVD EYDQSELAKG KDITNKPHES VDEYDQTELA KGKEVTNKPH 720
  721 ENLEEYNETD LAKGKEVTNK PHESVDEYDQ SELAKGKDIT NKPHESVDEY DQTELAKGKE 780
  781 VTNKPHENLE EYNETDLAKG KEVTNKAHEN LEEYNETDLA KGKEVTNKAH ENLEEYNETD 840
  841 LAKGKEVTNK AHENLEEYNE TDLAKGKEVT NKARENLEEY NETDLAKGKE VTNKARENLE 900
  901 EYNETDLAKG KEVTNKAHEN LEEYNETDLA KGKEVTNKAH ENLEEYNETD LAKGKEVTNK 960
  961 AHENLEEYNE TDLAKGKEVT NKARENLEEY NETDLAKGKE VTNKARENLE EYNETDLAKG1020
 1021 KEVTNKAREN LEEYNETDLA KGKEVTNKAR ENLEEYEEKD YMKNNELQNK GSDGLKENAE1080
 1081 LKNKELRNKG SDGLKENAEL KNKELRNKGS DGLKENAELK NKELQNKGSE GLKENAELKN1140
 1141 KELQNKGSEG LKENAELKNK ELRNKGSEGL KENAELKNKE LQNKGSEGLK ENAELKNKEL1200
 1201 QNKGSEGLKE NAELKNKELQ NKGSEGLKEN AELKNKELRN KGSEGLKENV YTNNDLKNND1260
 1261 IQNKDLSNKD MKNKELLNKD ISNKDMKNKE LLNKDLSNED MKNKELLNKD IRNKDLKSIG1320
 1321 NMEQQNTGLK NTPSKGQQNT GLKNTPNERQ QNTGLKNTPS EGQQNTGLKN TPSEGQQNTG1380
 1381 LKNTPNERQQ NTGLKNTPSE GQQNTGLKNT PIEGQQNTGL KNTPSEGQQN TGLKNTPNER1440
 1441 QQNTGLKNAA NKGQQNTGLK NTPSKGQQNT GLKNTPNERQ QNTGLKNTPN ERQQNTGLKN1500
 1501 TPSEGQQNND LKNTPNERQQ NTGLKNTASK GQQNTGLKNA PNERQQNTGL KNTPSEGQQN1560
 1561 TGLKNTPSEG QQNTGLKNTP NERQQNTGLK NTASKGQQNT GLKNAPNERQ QNTGLKNTPS1620
 1621 EGQQNTGLKN SASKGQQNTG LKNTPSEGQQ NNDLKNAPNE RQQNTGLKNT PSEGQQNTGL1680
 1681 KNTPSEGQQN TGLKNTPSGG QQNTGLKNTP NERQQNTGLK NTPSEGQQNT GLKNTPNERQ1740
 1741 QNTGLKNAAN KGQQNTGLKN TPNEGQQNTG LKNTPSEGQQ NTGLKNTPSE GQQNTGLKNT1800
 1801 PSEGQQNTGL KNTPNERQQN TGLKNAANKG QQNTGLKNTP NEGQQNTGLK NTPSEGQQNT1860
 1861 GLKNTPSEGQ QNTGLKNTPS EGQQNTGLKN AANKGQQNTG LKNTPSGGQQ NTGLKNTPNE1920
 1921 GQQNTGLKNT PSEGQQNTGL KNTPSEGQQN TGLKNTPNER QQNTGLKNTP SEGQQNTGLK1980
 1981 NTPSEGQPNT GLKNTPNEGQ QNTGLKNTPS EGQQNTGLKN AANKGQQNTG LKNTPNEGQQ2040
 2041 NTGLKNTPSE GQQNTGLKNT PSEGQQNTGL KNTPSEGQQN TGLKNAANKG QQNTGLKNTP2100
 2101 NERQQNTGLK NTPNEGQQNT GLKNTPSEGQ QNTGLKNTPS EGQQNTGLKN TPSEGQQNTG2160
 2161 LKNTPSEGQP NTGLKNTPNE GQQNTGLKNT PSEGQQNTGL KNAANKGQQN TGLKNTPSEG2220
 2221 QQNTGLKNTP SEGQQNTGLK NAANKGQQNT GLKNTPSEGQ QNTGLKNTPS EGQQNTGLKN2280
 2281 AANKGQQNTG LKNTPSEGQP NTGLKNTPNE GQQNTGLKNT PSEGQQNTGL KNTPNEGQQN2340
 2341 TGLKNTPSEG QQNTGLKNTP NEGQQNNDLK NKASKGQQNN DLENDGLKHK PNQGQKHTEL2400
 2401 NNKNLKNKPT DGLKNVKDDE LSDNESSDNE KSKKNLRGKK N

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