YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7494361
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSLKSCFFK HNWNICLLWI RVILSSSLLI SLIFYNNVFN CKIKYGKSHT EDSFNLIKLR  60
   61 SLSEYNKNYD GEYYDILKLN IDNDKLKQCA MRIHPEVELI GKESECFGEN MNEVYIKLIT 120
  121 DLKPDLINVN ATSKKELLNE WDFIMNNFNG KNVEKIVEIK DETNDETDNE TNDETDNETN 180
  181 DEKSIKKKKK KRKGKPRIRY IAEMVGYGTI CIAGAPVILT LIIVGGFIWG VKGTKYARKY 240
  241 FNIIKKLLFT KVPF

Type	Start	End	Confidence
Non-Cytoplasmic	1	16	0.64
Transmembrane Helix	17	39	0.82
Cytoplasmic	40	199	0.69
Transmembrane Helix	200	228	0.78
Non-Cytoplasmic	229	254	0.68