YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7494411
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDHYINILL FALPLNILVY NQRSYYITPR HTETNRSLCE CELYSPTNYD SDPEMKRVMQ  60
   61 QFEDRTSQRF HEYEERMQSK RMQCKEQCDK EIQKIILKDK LEKELMDKFD TLHTDIQSDA 120
  121 IPTCVCEKSL ADKVEKGCLR CGYGLGTVAP TVGLIGAIAV NEWTKAATAA ATQKGIEAGI 180
  181 NVVIDTLKRL FNIEVVTDLK WKTLITAQNY TDKILVGDVI RKLGNTLCGG SEDTAGGFCL 240
  241 FTVKANTLPQ AINGHVTKAI SEGTAEVVKV TEAEMGKVTT SAGAYSTGII VSVVAIVVIV 300
  301 LIMIIIYLIL RYRRKRKMTK KMQFMKLLNE

Type	Start	End	Confidence
Non-Cytoplasmic	1	287	0.81
Transmembrane Helix	288	310	0.95
Cytoplasmic	311	330	0.96