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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|124806619, gi...
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKGLSKILE LGFFVGSFFF IWYITGEKIF KRKKKIVKEN ILLILRNLCY EIYTVLCETS  60
   61 KTTKHVYDML KNESNTTIEL SRLEEVLLNN GYKKKIEDVE KNVLKRFNVS VEDFYEELKN 120
  121 YEKDPDVQKY LNSIKKMYNE ALLGLQPKLP SIDEKISEDV IINLTSLIYK EKRKIYKTKI 180
  181 DSMLKNNEII DIQNTLSNAQ FFENLHKSTQ HVEEQIIKEN NNLVPNLFTF KYLVSYYSND 240
  241 PNFLQKKKYL ESKHGEKMIK ILKIKTSKKK KKRAHKEDRQ SSNSSVSFKS TPSLDVYNVP 300
  301 HLGTLEKEED HYSQQSKEME HMDKDSHVDF IPHNVDANLD KRDEQIEYIS ESGDMQPEKE 360
  361 YYEGEHITIR YEEEEDISEI YEEDRASRIY EEDRASGIYE EEHASGIYEE DHEERYRTSQ 420
  421 VSERSIKKSV TSQQDDIIHS HEEDNYVSDR EVIHDDSFVG DKDQIFDDNY VSEREEIKQD 480
  481 DDYISEREEI KQDDDYISER EEIKQDDDYI SEREEFKQDE SFVGDKDQIF EDDNYVSERE 540
  541 EIKQDDDYIS EREEIKQDDD YVNEREEIKQ DDDYVSEREE IKQDESFVGD KDQIFEDDNY 600
  601 VSEREESKQD ESFVGDKDQV FDDDYVSERE EIKQDDDYVS EREEIKQDES FVGDKDQIFE 660
  661 DDNYVSEREE FKQDESFVGD KDQNFDDDYV SEREDIKQDD DYISERDEIK QDDSFAGDKD 720
  721 QNFEDDNYVS EKEEIIYDNN NISDREQVIQ DDNYVSDKEE IIYDNNNNNN ISDSEVDKEN 780
  781 NNYVYENDEI IKDNKSMNEK DSSIHYDEEG TVKNKDIIEN VKEENSDIQM LENDIINNIN 840
  841 NEIIDNNENE IINNQSKVEN NTSMTEYEDV IDMDYKSPEN LFMFDQEYNI NEDHKGEINN 900
  901 NDNDNSKSVS GMGEREVSNE ENREDEMIRN EEVDYIKDDD EHNTDDIKED DEHNADDIKE 960
  961 DDEHNVDDIK EDDENNADDI KEDDEHNADD IKEDDEHNTD DIKEDDEHNT DDIKEDDEHN1020
 1021 ADDIKEDDEN NADDIKEDDE HNTDDIKEDD EHNTDDIKED DEHNADDIKD DEHNTDDIKD1080
 1081 DEHNTDDIKD DEHNADDIKD EDNDQVEDNQ ELNENLEGSD VPKDDEALNI EDTSEEQKET1140
 1141 DDKIESGSVR DKKNEGSTEK KIETKKGGLL MGIMKRKRFM SRDPKKKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle