YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125569901, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRRLLQGS VLPRMAGRAA AAPFSTASGE TVRATLFPGD GIGPEIAESV KQVFNVAGVP  60
   61 IEWEEHYVGT EVDPRTESFL TWESLESVRR NKVGLKGPMA TPIGKGHRSL NLTLRKELGL 120
  121 YANVRPCNSL PGYKTRYDDV NLVTIRENTE GEYSGLEHQV VRGVVESLKI ITRQASLRVA 180
  181 EYAFHYAKTN GRERVSAIHK ANIMRKTDGL FLKCCREVAE KYPEIVYEEV IIDNCCMTLV 240
  241 KNPGLFDVLV MPNLYGDIIS DLCAGLIGGL GLTPSCNIGE GGICLAEAVH GSAPDIAGKN 300
  301 LANPTALMLS AVMMLRHLQF NNQADRIHNA ILQTISEGKF RTADLGGKAS TSDFTKAVCD 360
  361 HI

Type	Start	End	Confidence
Signal Peptide	1	21	0.94
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	362	0.98