YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70780288
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKCLVTPLL ICILTIKILC FINLKKLRFN IIKTETILNM NEVGEIYSRP ENLKYEKFGR  60
   61 PQNDLILNVI ENKNEEKKFK KIPLWIMRQA GRYLPEYVEI RKKYDFFEIC KSPDLSSYVS 120
  121 IMPYDRFKTD MIVIFSDILI IFVAMGIDIK FVENLGPVFN LEIYNMNDFN KLNLNMKEII 180
  181 DNLYYVYDSI NLTKKKINND VPILGFCGSP FTLFMYLTKN NKKTYEDSFK FLYEKPNDAH 240
  241 QIINKLSDIC LNHLINQIDS GANIIQIFDS NAELVDKNIF NEFSIIYLKK VIEIIKKYRP 300
  301 NIYIILFIKN NFHDDIKNLK IDVLSITHKQ LIDNTDQFYF KLFQNNIILQ GALDPYILLL 360
  361 NDHELIQKHI IQMMKNITHK NKYIANLGHG ILPTTKIKNV NLFIDTIRNN EWS

Type	Start	End	Confidence
Signal Peptide	1	20	0.80
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	413	0.95