YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|86171923, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIHYINILL FELPLNILIY NQRNHYITRT PKATTRSLSE CELYAPSNYD NDPQMKEVMD  60
   61 NFNRQTQQRF HEYDHRMKTT RQKCKEQCDK EIQKIILKDK LEKELMDKFA TLHTDIQNDA 120
  121 IPTCVCEKSV ADKVEKNCMK CTQNLGGIVA PSSGVLAGIA EGALYVWRDA EIVAAIAAAK 180
  181 EAGAAKGAAV GIKEGIKVLL NRLNTDFGLS PVRIKELESV INGTNYTDVT FIYEAIYTTY 240
  241 KRSCVPVDVS VRFTVADTDL TFCESVWNQT LAVSQRNMGT SPLPIIQKTA QKIVSDANFT 300
  301 AAATAETATE EATTTLTAKN TGEVNATYMG YQTPIIASIV AILVIVLVMI IIYLILRYRR 360
  361 KKKMKKKLQY IKLLEE

Type	Start	End	Confidence
Non-Cytoplasmic	1	334	0.97
Transmembrane Helix	335	356	0.96
Cytoplasmic	357	376	0.97