YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18145749, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKKISLSII MAIGMLSLLF VGCTNNKEEK TLTVSIAASL QKPMEKIASN FEKENGVKIQ  60
   61 YNVGGSGTLK KQISDGADVD LFFSANTKYA KELIDEGLVN KDESYKILNN QLVLIENNDY 120
  121 NKPINSLEDL KNVEGKIAIG EISTVPAGQY AKESLEKVGV YKDIEDKLVF ARSVTNVKTY 180
  181 VENGEANLGF VYKTDALDLK NSKIVYEVPN DYHKPIEYEL CLLKNSKNNK EAKKLIEYLK 240
  241 GEESKKIFSE YGFEVTKK

Type	Start	End	Confidence
Signal Peptide	1	23	0.97
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	258	0.99