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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18310857, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRKFLKKIA LIVSLMVVGQ SVYTFAKSSR FNEVEKSTLN ENIDLDKLAL WYDEPATNWE  60
   61 NEALPIGNGY MGGMIFGSVA SERIQYNEKT LWSGGPGAWE GYNGGNKEGA WEAVQEIRKI 120
  121 LAEGGTPSND LYQRVCGDQR AYGAYQNFGD IFLDFKSHEE SKVTNYRREL NIEESLSTVK 180
  181 YNYKGVNYER EYFCSYPDNV MVIKLKADKA SSLTVDVRNE GAHNGKNLSV ENNTLILSGA 240
  241 IEDNGMKYES QIKVINNGGS IQDKEDRISV ENADEITIIM SAGTDYVNEY PTYKGEDPHS 300
  301 AVTERINNAV NLGYDELKSR HIEDYKNLFD RVDLNLGELK LDKPTDEMLN EYKTNQSNSL 360
  361 ETLFFQYGRY LLISSSREGS LPANLQGVWN NSNNPPWSSD YHFNVNIQMN YWPAEVANLS 420
  421 ETAIPLVEYV ESLREPGRKT AEMHCGIEGA MENKNGWTVN TMNNPFGFTA MGWEFDWGWA 480
  481 PTSNAWISQN LWEHYNFTDD KDYLRENIYP IMKEAAQFWT QFLVEYTHSD GKTYLVSSPS 540
  541 YSPEHGPRTV GTTFDQELIW QLFTDTIKAS ETLGIDEEFR AELENKRERL LKPQIGKHGQ 600
  601 VQEWKDDIDD PNNNHRHISH LVGLYPGTQI NQKDTPELYE AAKVTMNHRG DGGTGWSKAN 660
  661 KINLWARLLD GDRAHRLLEN QLTTSTLENL FDTHPPFQID GNMGAVSGMA EMLIQSHLGT 720
  721 INPLPALPTA WEDGSFDGLK ARGNFEISAN WNNNSLNLLK IKSGSGNDCY LEYPGITEAI 780
  781 ITDANGNKIT PEVVSENVVK FQTEVNGEYK VEGMPMEKPE KVNGLKALRN GDNSVSLKWN 840
  841 KTKFAEVYDV YRKGEGDFEL IAEDVKTEEF IDENAPSNDS YSYLYYVVAK NSEGLGEASE 900
  901 KVAVETSVYL SELEWESAST GYGEIQKDAS CDGNTITLKG ENGEKVSYDK GIGTHAHSEI 960
  961 VYSLEGLDYY DYFETFVGVD QEMAGTVASI SFEVYLDNEK VFDSGLMTGD TKQKHVKVPI1020
 1021 AGKNTLKLVV KDGGDSIGSD HGSFGDAKLT KVHAVSNADL KSLNINGNPL EEFNGSKYEY1080
 1081 SYDLKKGENL QNLNIEAEAF TSEAKIEITK PEELPGEAVV RVTSKDETMH KEYRVLINPY1140
 1141 VIVEESIIAY YNFENSSNLG EDSSKNSFHG EVNGTVTQGD SKDGKAANFG DGYIRVESND1200
 1201 SLKLDDNIVI ETEVYLDEYT NYWQKIAQKI NNGTGKGGFL IDVSPQGKLR FHAEGSITQF1260
 1261 ISNKAIPLNE WTNIKVIFEH SKGEASIYIN GELDKTVKPS SPLEVSDLPL IIGADSNGND1320
 1321 KLKGKMNNLT ISSIERRVAS SNSSLSDISI NGETMEVFKK DVFDYEIDLE EGTNIVPEIT1380
 1381 ATSEDSNATI EIKNAEILPG VSKIKVIAED GTESIYTINL NIKGKNPLKA DFNKNGEIDL1440
 1441 GDLSMVSKYF GSNNSEFDLD GDGLVGEYEI NFVSSELLK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle