YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18145000, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLFNALTI AGSDSSGGAG IQADIKAFSA NGVYGMSIIT AITAQNTQGV FGIMDVTPEI  60
   61 IEKQIDVIFN DIEVGAIKIG MVSKIESIKA ISNALGRVEK LPQIVLDPVM ISKSGFKLLS 120
  121 DDAKNTLIEK LIPIATLITP NLPETEELLG REILTIEDMK KAACDLKKLG AKNVLIKGGH 180
  181 LEGEATDILY DGENFTLFNE ERINTKHTHG TGCTLSSAIT ANLSKGMNIV DSVRSGKEYI 240
  241 TGAIKNGFEL GKGVGPTHHF YKFY

Type	Start	End	Confidence
Signal Peptide	1	18	0.84
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	264	0.99