YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18309619, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRRRVVIAL SSILAMGFLL TGCGGGSRAN IIKISGSSSV GPLVEAEAEV FKKDMPDITV  60
   61 EVNQLGSSAG IKDAINGTVE IGISSRDLKE KELESGIKEK PIAYDGMSVI INNENPVQNL 120
  121 TMEQIRDIYT GKITNWKEVG GEDTPIVLVS REDGSGTRDA FQEIVGFNSE EISPQAQISD 180
  181 GSGSIKTMVS GNKNAIGYIS FSYVDNSVHA VSIDGVKPTA ENVQNKMYKL SRPFLLVYKE 240
  241 ENLNENSKKF IDFIMSKEGQ EIVEEDGLIS VT

Type	Start	End	Confidence
Signal Peptide	1	29	0.94
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	272	0.99