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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|18144265, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRRKISALL LSCTLAMNIS SFNEIVLADE NKGEEVQKES HNESNCIAGD YHEVNNGNAK  60
   61 NTENTPVING IKVNKQLIDI NYSQGVTINP KYIVIHDTDN RQAGANAMAN RNYFANHPNA 120
  121 KASAHYIIDE GNIIQALEDT WKGWHVGDGN NPNINNSTTI AIELCVNKEN DFDKTLENGI 180
  181 ELTKYLVNKY NIPAENVVMH RDASGKTCSR MMIEDRPSLW PYFKERISGG DGSLEDDGLK 240
  241 PKMQGKVTNA SVLNVRESPS TSGRIVHKLN RNQVVGIYEE LNGWYKIDYI DGVKKKYGYV 300
  301 SKDYISIINE NPEDEETNGD IEIEKPSVSV NKQGIVKVNS ALNMRSGPGS NYGVIGTLRN 360
  361 NDEVEIIKEV DGWYEIKFNG KSGYVSSQYI KVLDNESNEE KPVEPEKPSV SLNKQGVVKV 420
  421 NSALNMRSGP GSNYGVIGTL RNNDEVEIIK EVDGWYEIKF NGKSGYVSSQ YIKVLDNESN 480
  481 EEKPVEPEKP SVSLNKQGVV KVNSALNMRS GPGSNYGVIG TLRNNDKVEI IKEVDGWYEI 540
  541 RFNGKVGYAS KSYITIVNEG SNNGTDSVIK EGTVYGVSTN LNVRTGPGTS YQVIGYLLSG 600
  601 DKVKILGDEN GWYKVQFNAS TGTKNGYVSK DYIKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle