YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18144169, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNKIRKAII PAAGLGTRFL PATKAQPKEM LPIVDKPTIQ YIIEEAIASG IEEILVITGR  60
   61 SKKSIEDHFD RNVELEMELE KSGKTELLDL VRDISDMVDI HYIRQKEPRG LGHAIYCAKT 120
  121 FVGDEPFAIL LGDDVVYNEE KPCLKQLIDC YNEYRTSVLG VQTVPEENVS KYGIVNGKHI 180
  181 EGRVYKVKGL VEKPSPEEAP SNVAILGRYI VTPRIFDILE NTKPGKGGEI QLTDALLELM 240
  241 SEEAMYAYDF EGRRYDVGDK LGFLEATVEY ALRRPDLRDG FIDYLRELSA TENIFTEANG 300
  301 KEKKDKEEEL VTEA

Type	Start	End	Confidence
Signal Peptide	1	25	0.86
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	314	0.99