YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|108809671, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRYSSHGRW VIWLSFLIAM VLQIMPWPEQ IYMFRPSWLA LVLIYWVMAL PHRVNVGTGF  60
   61 ILGLIMDLIL GSTLGVRALA FSIIAYLVAF KFQLFRNMAL WQQALIVMLL SLTMDVVVFW 120
  121 SEFLVINVAF RPEVFWSSVV NGILWPWLFL LMRKIRRQFS VQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.44
Transmembrane Helix	7	27	0.86
Cytoplasmic	28	33	0.38
Transmembrane Helix	34	50	0.55
Non-Cytoplasmic	51	63	0.53
Transmembrane Helix	64	90	0.77
Cytoplasmic	91	98	0.75
Transmembrane Helix	99	121	0.84
Non-Cytoplasmic	122	133	0.63
Transmembrane Helix	134	151	0.95
Cytoplasmic	152	162	0.83