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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51597792, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQIRVLAQY YVDLMVKLGL VRFSLLLASA LVLLAMVVQM AVTFVLRGSV ETLDLVRSIF  60
   61 FGLLITPWAV YFLSVVVEQL EESRQRLSRL VDKLEVMRHR DLELNKQLTE NITQLNQEIV 120
  121 EREKAEKAHL QVVDKLKEEM GHREQAQIEL GQQSALLRSF LDASPDLVYY RNEDNEFSGC 180
  181 NRAMELLTGK SEKQLVGLTP KDVYAPDIAE KVMETDEKVF RHNVSLTYEQ WLVYPDGRKA 240
  241 CFELRKVPFY DRVGKRHGLM GFGRDITERK RYQDALENAS RDKTTFISTI SHELRTPLNG 300
  301 IVGLSRILLD TELDAEQLKY LKTIHVSAIT LGNIFNDIIE MDKLERRKVQ LDNQPVDFTG 360
  361 FMADLENLSG LLVQPKGLKF IMEPQLPLPE KVIADGTRLR QILWNLIGNA VKFTQQGKIV 420
  421 VRVRREGNDR LIFEVEDSGM GIPEDEQDKI FAMYYQVKDR NGGRPATGTG IGLAVSKRLA 480
  481 QSMGGDITVK STQGVGSCFT LTIKAPAVQE ASNAPSGDDM PLPALHVLLV EDIELNVIVA 540
  541 RSVLEKLGNS VDVAMNGHDA LAMFNPEDFD LVLLDIQLPD MSGLDIARQI RAEYGKQSLP 600
  601 PLVALTANVL KDKKEYLDAG MDDVLSKPLS VPALTAMIKQ FWDSKPSSAV QKQEHKVMQT 660
  661 HESLLDTTML EQYIDLVGPQ LIHQSLEMFE QMMPGYLAVL DSNMTARDQK GITEEAHKIK 720
  721 GAAGSVGLRH IQQLAQQIQT PTLPAWWDNV QDWVDELKLE WRNDVQVLRE WAAEVEKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle