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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|51588108, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.60
Topology Confidence: 0.14
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKNLILWLV IAVVLMSVFQ SFGPSESNGR RVDYSTFMSD VTQDQVREAR INGREINVSK  60
   61 KDNSKYTTFI PVNDPKLLDT LLTKNVKVVG EPPEEQSLLA SIFISWFPML LLIGVWIFFM 120
  121 RQMQGGGGKG AMSFGKSKAR MLTEDQIKTS FADVAGCDEA KEEVSELVDY LREPSRFQKL 180
  181 GGKIPKGVLM VGPPGTGKTL LAKAIAGEAK VPFFTISGSD FVEMFVGVGA SRVRDMFEQA 240
  241 KKAAPCIIFI DEIDAVGRQR GAGLGGGHDE REQTLNQMLV EMDGFEGNEG IIVIAATNRP 300
  301 DVLDPALLRP GRFDRQVVVG LPDVRGREQI LKVHMRRVPL DTDIDASVIA RGTPGFSGAD 360
  361 LANLVNEAAL FAARGNKRVV SMVEFEKAKD KIMMGAERRS MVMTEAQKES TAYHEAGHAI 420
  421 IGRLVPEHDP VHKVTIIPRG RALGVTFFLP EGDAISASRQ KLESQISTLY GGRLAEEIIY 480
  481 GPEKVSTGAS NDIKVATSIA RNMVTQWGFS EKLGPLLYAE EEGEIFLGRS VAKAKHMSDE 540
  541 TARIIDQEVK LLVERNYQRA RKLLLENMDV LHSMKDALMK YETIDAPQID DLMNRKEVRP 600
  601 PAGWDNVTKN KSSDNDNTPT ATMPADEPNT PTSGNTVSEQ LGDK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle