YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|218930479, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLTLLGTGC AQQVPVFGCD CVICTQASVD PARRRKPCSA MLYYQGETTL IDAGLPTLDQ  60
   61 QFRAGEIQRF LLTHYHMDHV QGLFPLRWGC GNKIPVYGPP DLDGCDDLFK HPGILDFRPP 120
  121 LTAFQPLQFG ELRVTPVPLV HSKITFGYLL QSPNRAIAYL TDTVGLSADS ALFLASKSID 180
  181 LLVLDCSHAP QSPPPRNHND VTMALAIRDL LMPEETLLTH ASHQLDRWLL NNSLPTGVSV 240
  241 AYDNQTVTLV

Type	Start	End	Confidence
Signal Peptide	1	18	0.61
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	250	0.99