YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|108808664, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEAKRRLRL SNPWHLLATG FGSGLSPWAP GTMGSIAAIP FWLLLIQLPW QLYVLLVMFS  60
   61 ICIGIYICHR TAKDMQVHDH GSIVWDEFVG MWITLMALPV NSWQWVVAGF IAFRIFDIWK 120
  121 PWPIRWFDRN IHGGTGIMVD DIIAGVVAAA VIFVIGHYWP L

Type	Start	End	Confidence
Cytoplasmic	1	13	0.89
Transmembrane Helix	14	39	0.80
Non-Cytoplasmic	40	49	0.69
Transmembrane Helix	50	69	0.93
Cytoplasmic	70	87	0.80
Transmembrane Helix	88	113	0.81
Non-Cytoplasmic	114	136	0.72
Transmembrane Helix	137	159	0.88
Cytoplasmic	160	161	0.71