YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|149365323, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVFSVTDP ISAYAGNIYD SRGVYDVIRE FKRFSITATE YVGENGRKYI HISGYAGLRR  60
   61 IITGTRYGAS HPQMLSMGIG QQGLSSNIVK GLKFCILFSI GYRTIEGIFK DEYTLAEFIG 120
  121 NITMDMAKIA IVAATSFIVG VLFTATVLAG GSIIVVAGVA FAVGFVATAI LDHFDEKYGI 180
  181 SEKLIALLTK EMRKKPRTQE ANFQSILNGL GRLK

Type	Start	End	Confidence
Cytoplasmic	1	126	0.95
Transmembrane Helix	127	148	0.84
Non-Cytoplasmic	149	152	0.61
Transmembrane Helix	153	174	0.85
Cytoplasmic	175	214	0.86